Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0055 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1222398 bp
Thymine Count
1219260 bp
Guanine Count
1253701 bp
Cytosine Count
1255407 bp
Genome Length
4959521 bp
Protein-coding Genes
4532 genes
Non-Coding Genes
238 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf21 domain-containing protein | C9Z06_20615 | Not Available | Positive | 4294800 - 4296041 | 46334.9 |
| nucleotide exchange factor grpe | C9Z06_20620 | Not Available | Negative | 4296096 - 4296689 | 21813.1 |
| molecular chaperone grpe | C9Z06_20625 | Not Available | Negative | 4296686 - 4296880 | 7202.78 |
| nad(+) kinase | C9Z06_20630 | Not Available | Positive | 4296812 - 4297690 | 32568.3 |
| dna repair protein recn | C9Z06_20635 | Not Available | Positive | 4297776 - 4299437 | 61400.1 |
| outer membrane protein assembly factor bame | C9Z06_20640 | Not Available | Positive | 4299586 - 4299927 | 12302.8 |
| rnfh family protein | C9Z06_20645 | Not Available | Negative | 4299989 - 4300279 | 10790.0 |
| ubiquinone-binding protein | C9Z06_20650 | Not Available | Negative | 4300269 - 4300745 | 17743.7 |
| ssra-binding protein smpb | C9Z06_20655 | Not Available | Positive | 4300877 - 4301359 | 18270.1 |
| Tmrna,resume consensus sequence (at 83): aatagtcgcaaacgacga | Not Available | Not Available | Positive | 4301574 - 4301936 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





