Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0055 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1222398 bp
Thymine Count
1219260 bp
Guanine Count
1253701 bp
Cytosine Count
1255407 bp
Genome Length
4959521 bp
Protein-coding Genes
4532 genes
Non-Coding Genes
238 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| diguanylate cyclase | C9Z06_20365 | Not Available | Negative | 4241491 - 4242873 | 53210.8 |
| glycoside hydrolase family 10 protein | C9Z06_20370 | Not Available | Negative | 4243245 - 4244564 | 49575.9 |
| glutamate:gamma-aminobutyrate antiporter | C9Z06_20375 | Not Available | Negative | 4244695 - 4246230 | 55080.0 |
| bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/imp cyclohydrolase | C9Z06_20380 | Not Available | Positive | 4247019 - 4248608 | 57361.4 |
| phosphoribosylamine--glycine ligase | C9Z06_20385 | Not Available | Positive | 4248620 - 4249909 | 46016.0 |
| sigma-54-dependent response regulator transcription factor zrar | C9Z06_20390 | Not Available | Negative | 4249906 - 4251231 | 48375.3 |
| two-component system sensor histidine kinase zras | C9Z06_20395 | Not Available | Negative | 4251228 - 4252604 | 50520.1 |
| zinc resistance-associated protein | C9Z06_20400 | Not Available | Positive | 4252842 - 4253267 | 15200.3 |
| duf1481 domain-containing protein | C9Z06_20405 | Not Available | Negative | 4253269 - 4253964 | 26318.9 |
| dna-binding protein hu-alpha | C9Z06_20410 | Not Available | Negative | 4253977 - 4254249 | 9535.51 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





