Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0055 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1222398 bp
Thymine Count
1219260 bp
Guanine Count
1253701 bp
Cytosine Count
1255407 bp
Genome Length
4959521 bp
Protein-coding Genes
4532 genes
Non-Coding Genes
238 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| leucine-rich repeat domain-containing protein | C9Z06_20265 | Not Available | Negative | 4220471 - 4221802 | 50617.9 |
| hypothetical protein | C9Z06_20270 | Not Available | Negative | 4221826 - 4222116 | 10722.6 |
| drug/metabolite dmt transporter permease | C9Z06_20275 | Not Available | Negative | 4222375 - 4223256 | 31618.4 |
| sulfate abc transporter substrate-binding protein | C9Z06_20280 | Not Available | Positive | 4223488 - 4224075 | 21465.8 |
| formate dehydrogenase-n subunit alpha | C9Z06_20285 | Not Available | Positive | 4224124 - 4226535 | 89811.8 |
| formate dehydrogenase nitrate-inducible iron-sulfur subunit | C9Z06_20290 | Not Available | Positive | 4226548 - 4227432 | 32240.4 |
| formate dehydrogenase nitrate-inducible cytochrome b556(fdn) subunit | C9Z06_20295 | Not Available | Positive | 4227425 - 4228078 | 25370.0 |
| addiction module antidote protein, higa family | C9Z06_20300 | Not Available | Negative | 4228129 - 4228413 | 10401.7 |
| alcohol dehydrogenase adhp | C9Z06_20305 | Not Available | Negative | 4228560 - 4229570 | 35371.6 |
| nad-dependent malic enzyme | C9Z06_20310 | Not Available | Negative | 4229704 - 4231401 | 63167.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





