Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0055 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1222398 bp
Thymine Count
1219260 bp
Guanine Count
1253701 bp
Cytosine Count
1255407 bp
Genome Length
4959521 bp
Protein-coding Genes
4532 genes
Non-Coding Genes
238 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type 1 fimbrial protein subunit fima | C9Z06_19800 | Not Available | Positive | 4121227 - 4121769 | 18475.5 |
| molecular chaperone fimc | C9Z06_19805 | Not Available | Positive | 4121989 - 4122681 | 25432.1 |
| fimbrial biogenesis outer membrane usher protein | C9Z06_19810 | Not Available | Positive | 4122712 - 4125321 | 96251.9 |
| type 1 fimbrin d-mannose specific adhesin fimh | C9Z06_19815 | Not Available | Positive | 4125334 - 4126341 | 36555.0 |
| fimbriae assembly protein | C9Z06_19820 | Not Available | Positive | 4126352 - 4126867 | 18222.6 |
| fimbriae biosynthesis transcriptional regulator fimz | C9Z06_19825 | Not Available | Negative | 4126870 - 4127502 | 23664.9 |
| Trna-arg | Not Available | Not Available | Positive | 4127745 - 4127821 | Not Available |
| site-specific integrase | C9Z06_19835 | Not Available | Negative | 4127837 - 4129000 | 45023.5 |
| dna-binding protein | C9Z06_19840 | Not Available | Negative | 4128856 - 4129311 | 16961.1 |
| hypothetical protein | C9Z06_19845 | Not Available | Negative | 4129227 - 4129532 | 12161.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





