Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0055 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1222398 bp
Thymine Count
1219260 bp
Guanine Count
1253701 bp
Cytosine Count
1255407 bp
Genome Length
4959521 bp
Protein-coding Genes
4532 genes
Non-Coding Genes
238 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutamate racemase | C9Z06_19640 | Not Available | Positive | 4087810 - 4088667 | 31133.8 |
| rhs repeat protein | C9Z06_19645 | Not Available | Positive | 4088760 - 4090643 | 71663.0 |
| hypothetical protein | C9Z06_19650 | Not Available | Positive | 4090683 - 4091051 | 14213.2 |
| hypothetical protein | C9Z06_19660 | Not Available | Positive | 4091743 - 4092234 | 18476.3 |
| trna 2-selenouridine(34) synthase mnmh | C9Z06_19670 | Not Available | Negative | 4093236 - 4094330 | 41131.2 |
| hth-type transcriptional activator alls | C9Z06_19675 | Not Available | Negative | 4094399 - 4095325 | 34513.6 |
| ureidoglycolate lyase | C9Z06_19680 | Not Available | Positive | 4095555 - 4096037 | 18223.6 |
| transcriptional regulator | C9Z06_19685 | Not Available | Positive | 4096115 - 4096930 | 29271.4 |
| glyoxylate carboligase | C9Z06_19690 | Not Available | Positive | 4097020 - 4098801 | 64750.5 |
| hydroxypyruvate isomerase | C9Z06_19695 | Not Available | Positive | 4098814 - 4099590 | 29370.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





