Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0055 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1222398 bp
Thymine Count
1219260 bp
Guanine Count
1253701 bp
Cytosine Count
1255407 bp
Genome Length
4959521 bp
Protein-coding Genes
4532 genes
Non-Coding Genes
238 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| argininosuccinate lyase | C9Z06_19590 | Not Available | Positive | 4076185 - 4077558 | 50360.1 |
| hypothetical protein | C9Z06_19595 | Not Available | Positive | 4077583 - 4077804 | 8699.7 |
| d-galactonate dehydratase family protein | C9Z06_19600 | Not Available | Positive | 4078056 - 4079270 | 45812.8 |
| mfs transporter | C9Z06_19605 | Not Available | Positive | 4079337 - 4080620 | 46345.1 |
| dna-binding transcriptional regulator oxyr | C9Z06_19610 | Not Available | Positive | 4080872 - 4081789 | 34278.0 |
| si-specific nad(p)(+) transhydrogenase | C9Z06_19615 | Not Available | Negative | 4081772 - 4083172 | 51563.4 |
| hth-type transcriptional repressor fabr | C9Z06_19620 | Not Available | Positive | 4083503 - 4084153 | 24536.5 |
| yijd family membrane protein | C9Z06_19625 | Not Available | Positive | 4084153 - 4084512 | 13024.3 |
| trna (uridine(54)-c5)-methyltransferase trma | C9Z06_19630 | Not Available | Negative | 4084552 - 4085652 | 41969.3 |
| vitamin b12 transporter btub | C9Z06_19635 | Not Available | Positive | 4086021 - 4087865 | 68393.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





