Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0055 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1222398 bp
Thymine Count
1219260 bp
Guanine Count
1253701 bp
Cytosine Count
1255407 bp
Genome Length
4959521 bp
Protein-coding Genes
4532 genes
Non-Coding Genes
238 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| multidrug efflux mfs transporter permease subunit emrb | C9Z06_19435 | Not Available | Positive | 4039836 - 4041374 | 55627.7 |
| s-ribosylhomocysteine lyase | C9Z06_19440 | Not Available | Negative | 4041438 - 4041953 | 19417.3 |
| glutamate--cysteine ligase | C9Z06_19445 | Not Available | Negative | 4042103 - 4043659 | 58318.6 |
| deda family protein | C9Z06_19450 | Not Available | Negative | 4043732 - 4044160 | 15616.6 |
| fructose-1-phosphate/6-phosphogluconate phosphatase | C9Z06_19455 | Not Available | Negative | 4044157 - 4044723 | 20800.1 |
| Trna-arg | Not Available | Not Available | Positive | 4045004 - 4045080 | Not Available |
| duf4329 domain-containing protein | C9Z06_19465 | Not Available | Positive | 4045082 - 4045700 | 23275.0 |
| hypothetical protein | C9Z06_19470 | Not Available | Positive | 4045702 - 4045938 | 8624.59 |
| yiix family permuted papain-like enzyme | C9Z06_19480 | Not Available | Negative | 4046931 - 4047539 | 23138.9 |
| met repressor | C9Z06_19485 | Not Available | Negative | 4047723 - 4048040 | 12141.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





