Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0055 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1222398 bp
Thymine Count
1219260 bp
Guanine Count
1253701 bp
Cytosine Count
1255407 bp
Genome Length
4959521 bp
Protein-coding Genes
4532 genes
Non-Coding Genes
238 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atpase | C9Z06_19275 | Not Available | Negative | 4009831 - 4009950 | 4328.2 |
| dna invertase | C9Z06_19280 | Not Available | Negative | 4010105 - 4010323 | 8218.36 |
| Trna-met | Not Available | Not Available | Positive | 4012802 - 4012877 | Not Available |
| protein csid | C9Z06_19300 | Not Available | Positive | 4016025 - 4017002 | 37386.6 |
| l-2-hydroxyglutarate oxidase | C9Z06_19305 | Not Available | Positive | 4017022 - 4018290 | 46113.7 |
| nadp-dependent succinate-semialdehyde dehydrogenase i | C9Z06_19310 | Not Available | Positive | 4018313 - 4019761 | 51820.2 |
| 4-aminobutyrate--2-oxoglutarate transaminase | C9Z06_19315 | Not Available | Positive | 4019775 - 4021055 | 45690.3 |
| gaba permease | C9Z06_19320 | Not Available | Positive | 4021366 - 4022766 | 51097.1 |
| transcriptional regulator | C9Z06_19325 | Not Available | Positive | 4022787 - 4023449 | 24992.3 |
| peptidoglycan-binding protein lysm | C9Z06_19330 | Not Available | Negative | 4023450 - 4023899 | 16036.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





