Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0055 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1222398 bp
Thymine Count
1219260 bp
Guanine Count
1253701 bp
Cytosine Count
1255407 bp
Genome Length
4959521 bp
Protein-coding Genes
4532 genes
Non-Coding Genes
238 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| yciy family protein | C9Z06_19170 | Not Available | Positive | 3990549 - 3990722 | 7102.81 |
| voltage-gated potassium channel protein | C9Z06_19175 | Not Available | Negative | 3990777 - 3992030 | 46080.2 |
| ycii family protein | C9Z06_19180 | Not Available | Negative | 3992329 - 3992625 | 10602.6 |
| tonb system transport protein tonb | C9Z06_19185 | Not Available | Positive | 3992849 - 3993568 | 26063.6 |
| acyl-coa thioester hydrolase ycia | C9Z06_19190 | Not Available | Negative | 3993608 - 3994006 | 14231.4 |
| septation protein a | C9Z06_19195 | Not Available | Negative | 3994111 - 3994650 | 20791.3 |
| upf0259 family protein | C9Z06_19200 | Not Available | Negative | 3994680 - 3995423 | 26466.7 |
| outer membrane protein ompw | C9Z06_19210 | Not Available | Positive | 3995780 - 3996433 | 23528.8 |
| integrase | C9Z06_19215 | Not Available | Negative | 3996479 - 3997609 | 43185.1 |
| excisionase | C9Z06_19220 | Not Available | Negative | 3997587 - 3997835 | 9206.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





