Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0055 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1222398 bp
Thymine Count
1219260 bp
Guanine Count
1253701 bp
Cytosine Count
1255407 bp
Genome Length
4959521 bp
Protein-coding Genes
4532 genes
Non-Coding Genes
238 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| thymidine kinase | C9Z06_19120 | Not Available | Positive | 3977488 - 3978105 | 23399.9 |
| bifunctional acetaldehyde-coa/alcohol dehydrogenase | C9Z06_19125 | Not Available | Negative | 3978407 - 3981082 | 96132.5 |
| naat family transporter yche | C9Z06_19130 | Not Available | Positive | 3981559 - 3982206 | 23522.7 |
| oligopeptide abc transporter substrate-binding protein oppa | C9Z06_19135 | Not Available | Positive | 3982943 - 3984574 | 60979.1 |
| peptide abc transporter permease | C9Z06_19140 | Not Available | Positive | 3984660 - 3985580 | 33445.3 |
| peptide abc transporter permease | C9Z06_19145 | Not Available | Positive | 3985595 - 3986503 | 33023.9 |
| abc transporter atp-binding protein | C9Z06_19150 | Not Available | Positive | 3986515 - 3987528 | 37148.7 |
| oligopeptide transport atp-binding protein oppf | C9Z06_19155 | Not Available | Positive | 3987525 - 3988529 | 37183.8 |
| duf440 family protein | C9Z06_19160 | Not Available | Negative | 3988582 - 3988911 | 12687.7 |
| cardiolipin synthase | C9Z06_19165 | Not Available | Negative | 3988946 - 3990406 | 54825.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





