Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0055 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1222398 bp
Thymine Count
1219260 bp
Guanine Count
1253701 bp
Cytosine Count
1255407 bp
Genome Length
4959521 bp
Protein-coding Genes
4532 genes
Non-Coding Genes
238 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcription-repair coupling factor | C9Z06_18665 | Not Available | Negative | 3879652 - 3883098 | 129989.0 |
| acyltransferase family protein | C9Z06_18670 | Not Available | Negative | 3883226 - 3884299 | 40752.8 |
| lipoprotein-releasing system protein lolc | C9Z06_18675 | Not Available | Positive | 3884561 - 3885760 | 43266.5 |
| lipoprotein-releasing abc transporter atp-binding protein lold | C9Z06_18680 | Not Available | Positive | 3885753 - 3886454 | 25439.9 |
| lipoprotein-releasing abc transporter permease subunit lole | C9Z06_18685 | Not Available | Positive | 3886454 - 3887698 | 45337.0 |
| n-acetylglucosamine kinase | C9Z06_18690 | Not Available | Positive | 3887727 - 3888638 | 33044.6 |
| nad-dependent protein deacylase | C9Z06_18695 | Not Available | Positive | 3888654 - 3889475 | 30938.2 |
| tpm domain-containing protein | C9Z06_18700 | Not Available | Negative | 3889614 - 3890402 | 28906.7 |
| duf3592 domain-containing protein | C9Z06_18705 | Not Available | Negative | 3890399 - 3890860 | 17258.4 |
| spermidine/putrescine-binding periplasmic protein | C9Z06_18710 | Not Available | Negative | 3890918 - 3891964 | 38869.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





