Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0055 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1222398 bp
Thymine Count
1219260 bp
Guanine Count
1253701 bp
Cytosine Count
1255407 bp
Genome Length
4959521 bp
Protein-coding Genes
4532 genes
Non-Coding Genes
238 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mfs transporter | C9Z06_18315 | Not Available | Negative | 3813607 - 3814929 | 47180.9 |
| inner membrane protein yhjd | C9Z06_18320 | Not Available | Negative | 3815340 - 3816353 | 37902.6 |
| lysr family transcriptional regulator | C9Z06_18325 | Not Available | Negative | 3816402 - 3817301 | 33275.5 |
| response regulator transcription factor | C9Z06_18330 | Not Available | Positive | 3817821 - 3818423 | 22635.6 |
| trehalase | C9Z06_18335 | Not Available | Negative | 3818474 - 3820123 | 63718.1 |
| c-type cytochrome | C9Z06_18340 | Not Available | Positive | 3820528 - 3821925 | 51543.3 |
| glutamate decarboxylase | C9Z06_18345 | Not Available | Positive | 3822136 - 3822508 | 14169.7 |
| ycek/yidq family lipoprotein | C9Z06_18350 | Not Available | Positive | 3822720 - 3822947 | 8431.25 |
| acidic protein msyb | C9Z06_18355 | Not Available | Negative | 3822948 - 3823322 | 14259.9 |
| multidrug resistance protein mdtg | C9Z06_18360 | Not Available | Negative | 3823405 - 3824631 | 43870.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





