Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0055 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1222398 bp
Thymine Count
1219260 bp
Guanine Count
1253701 bp
Cytosine Count
1255407 bp
Genome Length
4959521 bp
Protein-coding Genes
4532 genes
Non-Coding Genes
238 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| yiab family inner membrane protein | C9Z06_18105 | Not Available | Positive | 3763869 - 3764306 | 16123.6 |
| acyltransferase | C9Z06_18110 | Not Available | Negative | 3764348 - 3765343 | 37600.1 |
| hypothetical protein | C9Z06_18115 | Not Available | Positive | 3765518 - 3765817 | 11324.8 |
| glycine--trna ligase subunit alpha | C9Z06_18120 | Not Available | Positive | 3765912 - 3766823 | 34718.2 |
| glycine--trna ligase subunit beta | C9Z06_18125 | Not Available | Positive | 3766833 - 3768902 | 76787.2 |
| cold-shock protein | C9Z06_18135 | Not Available | Negative | 3769568 - 3769780 | 7403.66 |
| hth-type transcriptional regulator | C9Z06_18140 | Not Available | Negative | 3770061 - 3770351 | 11033.5 |
| duf3053 domain-containing protein | C9Z06_18145 | Not Available | Positive | 3770785 - 3771495 | 25678.5 |
| glyoxylate/hydroxypyruvate reductase ghrb | C9Z06_18150 | Not Available | Negative | 3771545 - 3772519 | 35398.5 |
| lipoprotein | C9Z06_18155 | Not Available | Negative | 3772623 - 3773282 | 22198.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





