Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0055 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1222398 bp
Thymine Count
1219260 bp
Guanine Count
1253701 bp
Cytosine Count
1255407 bp
Genome Length
4959521 bp
Protein-coding Genes
4532 genes
Non-Coding Genes
238 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf4132 domain-containing protein | C9Z06_17425 | Not Available | Negative | 3621905 - 3625699 | 141050.0 |
| methionine--trna ligase | C9Z06_17430 | Not Available | Negative | 3625840 - 3627873 | 76244.9 |
| protein mrp | C9Z06_17435 | Not Available | Positive | 3628005 - 3629114 | 39940.4 |
| duf2574 family protein | C9Z06_17440 | Not Available | Positive | 3629377 - 3629658 | 10137.2 |
| type 1 fimbrial protein | C9Z06_17445 | Not Available | Positive | 3629951 - 3630493 | 19075.6 |
| fimbrial assembly protein | C9Z06_17450 | Not Available | Positive | 3630574 - 3631248 | 24864.4 |
| fimbrial biogenesis outer membrane usher protein | C9Z06_17455 | Not Available | Positive | 3631264 - 3633744 | 92360.1 |
| putative fimbrial-like adhesin protein | C9Z06_17460 | Not Available | Positive | 3633758 - 3634792 | 36861.9 |
| ni(ii)/co(ii) efflux transporter accessory subunit rcnb | C9Z06_17465 | Not Available | Negative | 3634874 - 3635212 | 12466.8 |
| nickel/cobalt efflux protein rcna | C9Z06_17470 | Not Available | Negative | 3635431 - 3636255 | 30441.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





