Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0055 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1222398 bp
Thymine Count
1219260 bp
Guanine Count
1253701 bp
Cytosine Count
1255407 bp
Genome Length
4959521 bp
Protein-coding Genes
4532 genes
Non-Coding Genes
238 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ubiquinone biosynthesis protein ubib | C9Z06_16965 | Not Available | Negative | 3523087 - 3524727 | 63206.4 |
| ubiquinone biosynthesis protein ubij | C9Z06_16970 | Not Available | Negative | 3524724 - 3525329 | 22153.8 |
| ubiquinone/menaquinone biosynthesis c-methyltransferase ubie | C9Z06_16975 | Not Available | Negative | 3525343 - 3526098 | 28074.8 |
| dna recombination protein rmuc | C9Z06_16980 | Not Available | Negative | 3526193 - 3527620 | 54767.6 |
| uridine phosphorylase | C9Z06_16985 | Not Available | Negative | 3527761 - 3528522 | 27151.7 |
| dienelactone hydrolase family protein | C9Z06_16990 | Not Available | Positive | 3528784 - 3529599 | 29469.8 |
| 5-methyltetrahydropteroyltriglutamate-- homocysteine s-methyltransferase | C9Z06_16995 | Not Available | Negative | 3529638 - 3531899 | 84725.1 |
| transcriptional regulator | C9Z06_17000 | Not Available | Positive | 3532017 - 3532970 | 35631.0 |
| dmt family transporter | C9Z06_17005 | Not Available | Negative | 3532858 - 3533757 | 33729.0 |
| pyridoxal phosphate phosphatase yigl | C9Z06_17010 | Not Available | Negative | 3533833 - 3534633 | 29723.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





