Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0055 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1222398 bp
Thymine Count
1219260 bp
Guanine Count
1253701 bp
Cytosine Count
1255407 bp
Genome Length
4959521 bp
Protein-coding Genes
4532 genes
Non-Coding Genes
238 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| redox-regulated atpase ychf | C9Z06_16415 | Not Available | Negative | 3412742 - 3413833 | 39669.6 |
| aminoacyl-trna hydrolase | C9Z06_16420 | Not Available | Negative | 3413950 - 3414534 | 21083.5 |
| stress-induced protein ychh | C9Z06_16425 | Not Available | Positive | 3414812 - 3415090 | 10486.9 |
| c4-dicarboxylic acid transporter daua | C9Z06_16430 | Not Available | Negative | 3415145 - 3416824 | 59432.8 |
| ribose-phosphate pyrophosphokinase | C9Z06_16435 | Not Available | Negative | 3416949 - 3417896 | 34220.3 |
| 4-diphosphocytidyl-2c-methyl-d-erythritol kinase | C9Z06_16440 | Not Available | Negative | 3418047 - 3418898 | 30955.2 |
| lipoprotein localization protein lolb | C9Z06_16445 | Not Available | Negative | 3418898 - 3419521 | 23552.1 |
| glutamyl-trna reductase | C9Z06_16450 | Not Available | Positive | 3419735 - 3420991 | 46332.5 |
| peptide chain release factor 1 | C9Z06_16455 | Not Available | Positive | 3421033 - 3422115 | 40519.6 |
| peptide chain release factor n(5)-glutamine methyltransferase | C9Z06_16460 | Not Available | Positive | 3422115 - 3422948 | 30976.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





