Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0055 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1222398 bp
Thymine Count
1219260 bp
Guanine Count
1253701 bp
Cytosine Count
1255407 bp
Genome Length
4959521 bp
Protein-coding Genes
4532 genes
Non-Coding Genes
238 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein umud | C9Z06_16315 | Not Available | Positive | 3386697 - 3387116 | 15064.2 |
| protein umuc | C9Z06_16320 | Not Available | Positive | 3387116 - 3388384 | 47682.4 |
| disulfide bond formation protein dsbb | C9Z06_16325 | Not Available | Negative | 3388430 - 3388960 | 20143.3 |
| na(+)/h(+) antiporter nhab | C9Z06_16330 | Not Available | Negative | 3389106 - 3390647 | 56731.8 |
| fatty acid metabolism transcriptional regulator fadr | C9Z06_16335 | Not Available | Positive | 3390869 - 3391588 | 26970.2 |
| spovr family protein | C9Z06_16340 | Not Available | Negative | 3391640 - 3393172 | 60817.1 |
| d-amino acid dehydrogenase | C9Z06_16345 | Not Available | Positive | 3393502 - 3394800 | 47610.1 |
| alanine racemase | C9Z06_16350 | Not Available | Positive | 3394810 - 3395880 | 38872.9 |
| k+/h+ antiporter nhap2 | C9Z06_16355 | Not Available | Negative | 3396266 - 3398002 | 62209.1 |
| muramoyltetrapeptide carboxypeptidase | C9Z06_16360 | Not Available | Negative | 3398097 - 3399011 | 33628.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





