Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0055 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1222398 bp
Thymine Count
1219260 bp
Guanine Count
1253701 bp
Cytosine Count
1255407 bp
Genome Length
4959521 bp
Protein-coding Genes
4532 genes
Non-Coding Genes
238 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytoplasmic protein | C9Z06_15740 | Not Available | Positive | 3291171 - 3291305 | 5109.11 |
| duf945 domain-containing protein | C9Z06_15745 | Not Available | Positive | 3291326 - 3292144 | 31143.3 |
| antirestriction protein | C9Z06_15750 | Not Available | Positive | 3292199 - 3292684 | 18167.3 |
| dna repair protein radc | C9Z06_15755 | Not Available | Positive | 3292700 - 3293176 | 17647.4 |
| duf987 domain-containing protein | C9Z06_15760 | Not Available | Positive | 3293263 - 3293484 | 8455.26 |
| type iv toxin-antitoxin system yeeu family antitoxin | C9Z06_15765 | Not Available | Positive | 3293564 - 3293932 | 13639.2 |
| toxin | C9Z06_15770 | Not Available | Positive | 3294022 - 3294399 | 13913.7 |
| duf957 domain-containing protein | C9Z06_15780 | Not Available | Positive | 3294621 - 3294818 | 7492.92 |
| duf4942 domain-containing protein | C9Z06_15785 | Not Available | Positive | 3294903 - 3295745 | 32578.3 |
| type ii secretion system protein | C9Z06_15790 | Not Available | Negative | 3296026 - 3296562 | 20267.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





