Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0055 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1222398 bp
Thymine Count
1219260 bp
Guanine Count
1253701 bp
Cytosine Count
1255407 bp
Genome Length
4959521 bp
Protein-coding Genes
4532 genes
Non-Coding Genes
238 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dimethyl sulfoxide reductase subunit a | C9Z06_15040 | Not Available | Positive | 3146312 - 3148735 | 90036.1 |
| dimethylsulfoxide reductase | C9Z06_15045 | Not Available | Positive | 3148746 - 3149363 | 22752.9 |
| dimethyl sulfoxide reductase anchor subunit | C9Z06_15050 | Not Available | Positive | 3149365 - 3150219 | 30491.6 |
| tat proofreading chaperone dmsd | C9Z06_15055 | Not Available | Positive | 3150262 - 3150876 | 23345.8 |
| voltage-gated clc-type chloride channel clcb | C9Z06_15060 | Not Available | Positive | 3151035 - 3152327 | 45690.0 |
| dethiobiotin synthase | C9Z06_15065 | Not Available | Negative | 3152280 - 3152975 | 24968.4 |
| rok family transcriptional regulator | C9Z06_15070 | Not Available | Negative | 3153100 - 3154320 | 44292.7 |
| lysr family transcriptional regulator | C9Z06_15075 | Not Available | Negative | 3154455 - 3155348 | 33297.4 |
| mfs transporter | C9Z06_15080 | Not Available | Positive | 3155455 - 3156708 | 45248.2 |
| acid shock protein | C9Z06_15085 | Not Available | Positive | 3157105 - 3157440 | 11538.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





