Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0055 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1222398 bp
Thymine Count
1219260 bp
Guanine Count
1253701 bp
Cytosine Count
1255407 bp
Genome Length
4959521 bp
Protein-coding Genes
4532 genes
Non-Coding Genes
238 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mannitol dehydrogenase family protein | C9Z06_14990 | Not Available | Negative | 3135678 - 3137138 | 53608.1 |
| mfs transporter | C9Z06_14995 | Not Available | Negative | 3137227 - 3138594 | 49370.7 |
| zn-dependent oxidoreductase | C9Z06_15000 | Not Available | Negative | 3138652 - 3139671 | 36508.1 |
| d-galactonate dehydratase family protein | C9Z06_15005 | Not Available | Negative | 3139683 - 3140897 | 45971.0 |
| ynfa family protein | C9Z06_15010 | Not Available | Negative | 3141103 - 3141429 | 11920.2 |
| duf1283 family protein | C9Z06_15015 | Not Available | Positive | 3141564 - 3141905 | 12909.3 |
| spermidine n1-acetyltransferase | C9Z06_15020 | Not Available | Positive | 3141940 - 3142500 | 21888.2 |
| ynfc family lipoprotein | C9Z06_15025 | Not Available | Negative | 3142503 - 3143213 | 26508.3 |
| duf1161 domain-containing protein | C9Z06_15030 | Not Available | Positive | 3143321 - 3143626 | 10519.3 |
| dimethyl sulfoxide reductase subunit a | C9Z06_15035 | Not Available | Positive | 3143825 - 3146251 | 89620.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





