Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0055 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1222398 bp
Thymine Count
1219260 bp
Guanine Count
1253701 bp
Cytosine Count
1255407 bp
Genome Length
4959521 bp
Protein-coding Genes
4532 genes
Non-Coding Genes
238 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutamate abc transporter permease | C9Z06_14470 | Not Available | Negative | 3025917 - 3026591 | 24916.2 |
| amino acid abc transporter permease | C9Z06_14475 | Not Available | Negative | 3026591 - 3027331 | 27456.2 |
| amino acid abc transporter substrate-binding protein | C9Z06_14480 | Not Available | Negative | 3027501 - 3028409 | 33378.9 |
| rhomboid family intramembrane serine protease | C9Z06_14485 | Not Available | Positive | 3028864 - 3030741 | 67683.7 |
| hypothetical protein | C9Z06_14490 | Not Available | Positive | 3030716 - 3030919 | 7632.21 |
| apolipoprotein n-acyltransferase | C9Z06_14495 | Not Available | Negative | 3030819 - 3032357 | 57042.1 |
| magnesium and cobalt efflux protein corc | C9Z06_14500 | Not Available | Negative | 3032382 - 3033260 | 33300.4 |
| endoribonuclease ybey | C9Z06_14505 | Not Available | Negative | 3033350 - 3033817 | 17526.6 |
| phoh family protein | C9Z06_14510 | Not Available | Negative | 3033814 - 3034893 | 40656.9 |
| trna (n6-isopentenyl adenosine(37)-c2)-methylthiotransferase miab | C9Z06_14515 | Not Available | Negative | 3035007 - 3036431 | 53666.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





