Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0055 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1222398 bp
Thymine Count
1219260 bp
Guanine Count
1253701 bp
Cytosine Count
1255407 bp
Genome Length
4959521 bp
Protein-coding Genes
4532 genes
Non-Coding Genes
238 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| endolytic peptidoglycan transglycosylase rlpa | C9Z06_14370 | Not Available | Negative | 3004765 - 3005853 | 37502.0 |
| rod shape-determining protein roda | C9Z06_14375 | Not Available | Negative | 3005864 - 3006976 | 40478.6 |
| penicillin-binding protein 2 | C9Z06_14380 | Not Available | Negative | 3006979 - 3008880 | 70860.6 |
| 23s rrna (pseudouridine(1915)-n(3))-methyltransferase rlmh | C9Z06_14385 | Not Available | Negative | 3008911 - 3009378 | 17342.1 |
| ribosome silencing factor | C9Z06_14390 | Not Available | Negative | 3009382 - 3009699 | 11582.9 |
| adenosylcobalamin/alpha-ribazole phosphatase | C9Z06_14395 | Not Available | Negative | 3009959 - 3010570 | 23325.8 |
| nicotinate-nucleotide adenylyltransferase | C9Z06_14400 | Not Available | Negative | 3010594 - 3011235 | 24529.3 |
| dna polymerase iii subunit delta | C9Z06_14405 | Not Available | Negative | 3011237 - 3012268 | 38702.0 |
| lps assembly lipoprotein lpte | C9Z06_14410 | Not Available | Negative | 3012268 - 3012849 | 21357.8 |
| leucine--trna ligase | C9Z06_14415 | Not Available | Negative | 3012864 - 3015446 | 97241.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





