Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0055 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1222398 bp
Thymine Count
1219260 bp
Guanine Count
1253701 bp
Cytosine Count
1255407 bp
Genome Length
4959521 bp
Protein-coding Genes
4532 genes
Non-Coding Genes
238 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-dependent clp protease proteolytic subunit | C9Z06_13615 | Not Available | Positive | 2848317 - 2848940 | 23188.1 |
| atp-dependent clp protease atp-binding subunit clpx | C9Z06_13620 | Not Available | Positive | 2849066 - 2850340 | 46358.7 |
| lon protease | C9Z06_13625 | Not Available | Positive | 2850528 - 2852882 | 87443.4 |
| dna-binding protein hu-beta | C9Z06_13630 | Not Available | Positive | 2853091 - 2853363 | 9226.08 |
| peptidylprolyl isomerase | C9Z06_13635 | Not Available | Positive | 2853555 - 2855426 | 68167.8 |
| hypothetical protein | C9Z06_13640 | Not Available | Positive | 2855577 - 2855948 | 12776.5 |
| long-chain acyl-coa thioesterase fadm | C9Z06_13645 | Not Available | Positive | 2856054 - 2856452 | 15089.2 |
| 7-cyano-7-deazaguanine synthase quec | C9Z06_13650 | Not Available | Negative | 2856504 - 2857199 | 25453.5 |
| sgrr family transcriptional regulator | C9Z06_13655 | Not Available | Negative | 2857264 - 2858964 | 64936.2 |
| hmp-pp phosphatase | C9Z06_13660 | Not Available | Positive | 2859064 - 2859882 | 30330.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





