Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0055 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1222398 bp
Thymine Count
1219260 bp
Guanine Count
1253701 bp
Cytosine Count
1255407 bp
Genome Length
4959521 bp
Protein-coding Genes
4532 genes
Non-Coding Genes
238 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf1778 domain-containing protein | C9Z06_13565 | Not Available | Negative | 2837959 - 2838270 | 11358.7 |
| protoheme ix farnesyltransferase | C9Z06_13570 | Not Available | Negative | 2838455 - 2839345 | 32250.4 |
| cytochrome bo(3) ubiquinol oxidase subunit 4 | C9Z06_13575 | Not Available | Negative | 2839357 - 2839686 | 12030.2 |
| cytochrome bo(3) ubiquinol oxidase subunit 3 | C9Z06_13580 | Not Available | Negative | 2839686 - 2840300 | 22624.0 |
| cytochrome o ubiquinol oxidase subunit i | C9Z06_13585 | Not Available | Negative | 2840290 - 2842281 | 74372.2 |
| cytochrome o ubiquinol oxidase subunit ii | C9Z06_13590 | Not Available | Negative | 2842303 - 2843250 | 34971.2 |
| muropeptide mfs transporter ampg | C9Z06_13595 | Not Available | Negative | 2843710 - 2845185 | 53336.4 |
| hypothetical protein | C9Z06_13600 | Not Available | Negative | 2845229 - 2845807 | 20951.3 |
| protein bola | C9Z06_13605 | Not Available | Positive | 2846112 - 2846429 | 11994.3 |
| trigger factor | C9Z06_13610 | Not Available | Positive | 2846773 - 2848071 | 48195.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





