Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0055 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1222398 bp
Thymine Count
1219260 bp
Guanine Count
1253701 bp
Cytosine Count
1255407 bp
Genome Length
4959521 bp
Protein-coding Genes
4532 genes
Non-Coding Genes
238 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 1-deoxy-d-xylulose-5-phosphate synthase | C9Z06_13515 | Not Available | Negative | 2827683 - 2829545 | 67606.9 |
| farnesyl-diphosphate synthase | C9Z06_13520 | Not Available | Negative | 2829570 - 2830469 | 32161.5 |
| exodeoxyribonuclease 7 small subunit | C9Z06_13525 | Not Available | Negative | 2830469 - 2830711 | 8952.42 |
| trna 4-thiouridine(8) synthase thii | C9Z06_13530 | Not Available | Positive | 2830917 - 2832365 | 55018.4 |
| protein deglycase yajl | C9Z06_13535 | Not Available | Negative | 2832419 - 2833009 | 20793.2 |
| 2-dehydropantoate 2-reductase | C9Z06_13540 | Not Available | Negative | 2832972 - 2833883 | 33842.7 |
| yajq family cyclic di-gmp-binding protein | C9Z06_13545 | Not Available | Positive | 2834051 - 2834542 | 18344.9 |
| mfs transporter | C9Z06_13550 | Not Available | Negative | 2834670 - 2836034 | 48774.9 |
| sel1 repeat family protein | C9Z06_13555 | Not Available | Positive | 2836442 - 2837377 | 34697.4 |
| gnat family n-acetyltransferase | C9Z06_13560 | Not Available | Negative | 2837433 - 2837975 | 19806.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





