Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0055 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1222398 bp
Thymine Count
1219260 bp
Guanine Count
1253701 bp
Cytosine Count
1255407 bp
Genome Length
4959521 bp
Protein-coding Genes
4532 genes
Non-Coding Genes
238 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| shikimate kinase | C9Z06_13360 | Not Available | Positive | 2795824 - 2796348 | 19151.9 |
| protein yaia | C9Z06_13365 | Not Available | Positive | 2796398 - 2796589 | 7281.55 |
| protein arom | C9Z06_13370 | Not Available | Positive | 2796847 - 2797524 | 24946.5 |
| pyrimidine/purine nucleoside phosphorylase | C9Z06_13375 | Not Available | Positive | 2797596 - 2797880 | 10234.9 |
| recombination-associated protein rdgc | C9Z06_13385 | Not Available | Negative | 2798581 - 2799492 | 33995.3 |
| fructokinase | C9Z06_13390 | Not Available | Positive | 2799617 - 2800525 | 32358.4 |
| mfs transporter araj | C9Z06_13395 | Not Available | Negative | 2800668 - 2801852 | 41929.0 |
| exonuclease subunit sbcc | C9Z06_13400 | Not Available | Negative | 2801978 - 2805121 | 118426.0 |
| exonuclease subunit sbcd | C9Z06_13405 | Not Available | Negative | 2805118 - 2806320 | 44716.1 |
| phosphate response regulator transcription factor phob | C9Z06_13410 | Not Available | Positive | 2806510 - 2807199 | 26435.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





