Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0055 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1222398 bp
Thymine Count
1219260 bp
Guanine Count
1253701 bp
Cytosine Count
1255407 bp
Genome Length
4959521 bp
Protein-coding Genes
4532 genes
Non-Coding Genes
238 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| propionate catabolism operon regulatory protein prpr | C9Z06_13110 | Not Available | Negative | 2740731 - 2741695 | 35190.1 |
| methylisocitrate lyase | C9Z06_13115 | Not Available | Positive | 2741934 - 2742824 | 32137.5 |
| 2-methylcitrate synthase | C9Z06_13120 | Not Available | Positive | 2742869 - 2744038 | 43136.6 |
| 2-methylcitrate dehydratase | C9Z06_13125 | Not Available | Positive | 2744072 - 2745523 | 53984.8 |
| propionate--coa ligase | C9Z06_13130 | Not Available | Positive | 2745563 - 2747449 | 69351.8 |
| cytosine permease | C9Z06_13135 | Not Available | Positive | 2747686 - 2748945 | 43680.4 |
| cytosine deaminase | C9Z06_13140 | Not Available | Positive | 2748935 - 2750218 | 47611.9 |
| transcriptional regulator cynr | C9Z06_13145 | Not Available | Negative | 2750258 - 2751157 | 32955.7 |
| carbonic anhydrase | C9Z06_13150 | Not Available | Positive | 2751267 - 2751926 | 23765.6 |
| cyanase | C9Z06_13155 | Not Available | Positive | 2751957 - 2752427 | 17033.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





