Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0055 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1222398 bp
Thymine Count
1219260 bp
Guanine Count
1253701 bp
Cytosine Count
1255407 bp
Genome Length
4959521 bp
Protein-coding Genes
4532 genes
Non-Coding Genes
238 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphoenolpyruvate--protein phosphotransferase | C9Z06_12855 | Not Available | Positive | 2684261 - 2686756 | 92193.3 |
| arac family transcriptional regulator | C9Z06_12860 | Not Available | Negative | 2686759 - 2687616 | 32416.5 |
| response regulator transcription factor | C9Z06_12865 | Not Available | Negative | 2687629 - 2688363 | 28722.6 |
| sensor histidine kinase | C9Z06_12870 | Not Available | Negative | 2688378 - 2690075 | 62661.3 |
| glutamate--pyruvate aminotransferase alac | C9Z06_12875 | Not Available | Positive | 2690452 - 2691690 | 46218.8 |
| membrane protein ypdk | C9Z06_12880 | Not Available | Negative | 2691755 - 2691826 | 2704.57 |
| lipid a biosynthesis palmitoleoyltransferase | C9Z06_12885 | Not Available | Negative | 2692182 - 2693102 | 35495.5 |
| duf2545 family protein | C9Z06_12890 | Not Available | Positive | 2693455 - 2693697 | 8923.5 |
| lipoprotein | C9Z06_12895 | Not Available | Negative | 2693774 - 2694049 | 10210.5 |
| yfdx family protein | C9Z06_12900 | Not Available | Positive | 2694383 - 2695015 | 22907.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





