Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0055 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1222398 bp
Thymine Count
1219260 bp
Guanine Count
1253701 bp
Cytosine Count
1255407 bp
Genome Length
4959521 bp
Protein-coding Genes
4532 genes
Non-Coding Genes
238 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uridine diphosphate-n-acetylglucosamine-binding protein yvck | C9Z06_12600 | Not Available | Positive | 2633889 - 2634797 | 32790.0 |
| excinuclease abc subunit b | C9Z06_12605 | Not Available | Negative | 2634989 - 2637010 | 76230.6 |
| atp-dependent dethiobiotin synthetase biod | C9Z06_12610 | Not Available | Negative | 2637589 - 2638266 | 24140.9 |
| malonyl-acp o-methyltransferase bioc | C9Z06_12615 | Not Available | Negative | 2638259 - 2639014 | 28210.8 |
| 8-amino-7-oxononanoate synthase | C9Z06_12620 | Not Available | Negative | 2639001 - 2640155 | 41715.9 |
| biotin synthase | C9Z06_12625 | Not Available | Negative | 2640152 - 2641192 | 38650.3 |
| adenosylmethionine--8-amino-7-oxononanoate transaminase | C9Z06_12630 | Not Available | Positive | 2641279 - 2642568 | 47312.4 |
| kinase inhibitor | C9Z06_12635 | Not Available | Positive | 2642627 - 2643103 | 17086.0 |
| acyl-coa thioesterase | C9Z06_12640 | Not Available | Positive | 2643255 - 2644538 | 46084.7 |
| hydratase | C9Z06_12645 | Not Available | Negative | 2644680 - 2646941 | 81479.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





