Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0055 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1222398 bp
Thymine Count
1219260 bp
Guanine Count
1253701 bp
Cytosine Count
1255407 bp
Genome Length
4959521 bp
Protein-coding Genes
4532 genes
Non-Coding Genes
238 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna gyrase inhibitor yacg | C9Z06_12400 | Not Available | Negative | 2590785 - 2590982 | 7306.49 |
| cell division protein zapd | C9Z06_12405 | Not Available | Negative | 2590992 - 2591735 | 28293.3 |
| dephospho-coa kinase | C9Z06_12410 | Not Available | Negative | 2591735 - 2592355 | 22623.0 |
| gmp reductase | C9Z06_12415 | Not Available | Positive | 2592580 - 2593623 | 37385.8 |
| type iv pilin biogenesis protein | C9Z06_12420 | Not Available | Negative | 2593658 - 2594860 | 44418.2 |
| type ii secretion system protein gspe | C9Z06_12425 | Not Available | Negative | 2594850 - 2596235 | 50621.4 |
| prepilin peptidase-dependent pilin | C9Z06_12430 | Not Available | Negative | 2596245 - 2596685 | 15631.7 |
| carboxylating nicotinate-nucleotide diphosphorylase | C9Z06_12435 | Not Available | Negative | 2596888 - 2597781 | 32774.0 |
| 1,6-anhydro-n-acetylmuramyl-l-alanine amidase ampd | C9Z06_12440 | Not Available | Positive | 2597869 - 2598420 | 20537.2 |
| protein ampe | C9Z06_12445 | Not Available | Positive | 2598417 - 2599271 | 32123.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





