Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0055 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1222398 bp
Thymine Count
1219260 bp
Guanine Count
1253701 bp
Cytosine Count
1255407 bp
Genome Length
4959521 bp
Protein-coding Genes
4532 genes
Non-Coding Genes
238 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| l-ribulose-5-phosphate 4-epimerase | C9Z06_12200 | Not Available | Negative | 2545223 - 2545918 | 25548.4 |
| l-arabinose isomerase | C9Z06_12205 | Not Available | Negative | 2546087 - 2547589 | 56106.2 |
| ribulokinase | C9Z06_12210 | Not Available | Negative | 2547600 - 2549300 | 61159.7 |
| arabinose operon regulatory protein | C9Z06_12215 | Not Available | Positive | 2549639 - 2550517 | 33385.8 |
| deda family protein | C9Z06_12220 | Not Available | Positive | 2550603 - 2551367 | 28171.7 |
| thiamine abc transporter atp-binding protein thiq | C9Z06_12225 | Not Available | Negative | 2551481 - 2552179 | 25011.6 |
| thiamine/thiamine pyrophosphate abc transporter permease thip | C9Z06_12230 | Not Available | Negative | 2552163 - 2553773 | 59360.6 |
| thiamine abc transporter substrate binding subunit | C9Z06_12235 | Not Available | Negative | 2553749 - 2554732 | 36222.3 |
| transcriptional regulator | C9Z06_12240 | Not Available | Negative | 2554896 - 2556551 | 64007.7 |
| glucose uptake inhibitor sgrt | C9Z06_12245 | Not Available | Positive | 2556640 - 2556771 | 5410.48 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





