Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0055 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1222398 bp
Thymine Count
1219260 bp
Guanine Count
1253701 bp
Cytosine Count
1255407 bp
Genome Length
4959521 bp
Protein-coding Genes
4532 genes
Non-Coding Genes
238 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | C9Z06_12050 | Not Available | Positive | 2507034 - 2507984 | 34711.4 |
| non-specific ribonucleoside hydrolase rihc | C9Z06_12055 | Not Available | Positive | 2508050 - 2508964 | 32547.7 |
| 4-hydroxy-tetrahydrodipicolinate reductase | C9Z06_12060 | Not Available | Positive | 2509131 - 2509952 | 28761.3 |
| carbamoyl-phosphate synthase small subunit | C9Z06_12065 | Not Available | Positive | 2510408 - 2511556 | 41433.4 |
| carbamoyl-phosphate synthase large chain | C9Z06_12070 | Not Available | Positive | 2511574 - 2514795 | 117863.0 |
| carnitine metabolism transcriptional regulator caif | C9Z06_12075 | Not Available | Positive | 2515056 - 2515451 | 15393.0 |
| carnitine operon protein caie | C9Z06_12080 | Not Available | Negative | 2515537 - 2516127 | 21157.6 |
| carnitinyl-coa dehydratase | C9Z06_12085 | Not Available | Negative | 2516133 - 2516918 | 28207.8 |
| crotonobetaine/carnitine-coa ligase | C9Z06_12090 | Not Available | Negative | 2517027 - 2518580 | 58534.3 |
| l-carnitine coa-transferase | C9Z06_12095 | Not Available | Negative | 2518654 - 2519871 | 45099.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





