Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0055 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1222398 bp
Thymine Count
1219260 bp
Guanine Count
1253701 bp
Cytosine Count
1255407 bp
Genome Length
4959521 bp
Protein-coding Genes
4532 genes
Non-Coding Genes
238 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha/beta hydrolase | C9Z06_11585 | Not Available | Positive | 2415200 - 2416120 | 33680.4 |
| hypothetical protein | C9Z06_11590 | Not Available | Positive | 2416120 - 2416185 | 2420.94 |
| murein tripeptide amidase mpaa | C9Z06_11600 | Not Available | Positive | 2416455 - 2417183 | 26544.4 |
| l-ala-d/l-glu epimerase | C9Z06_11605 | Not Available | Negative | 2417158 - 2418123 | 34544.8 |
| thiol peroxidase | C9Z06_11610 | Not Available | Positive | 2418242 - 2418748 | 17864.3 |
| tyrr family transcriptional regulator | C9Z06_11615 | Not Available | Negative | 2418792 - 2420333 | 57627.5 |
| tigr01620 family protein | C9Z06_11620 | Not Available | Negative | 2420481 - 2421542 | 39363.5 |
| ycjx family protein | C9Z06_11625 | Not Available | Negative | 2421539 - 2422936 | 52625.6 |
| laci family transcriptional regulator | C9Z06_11630 | Not Available | Positive | 2423091 - 2424089 | 36151.2 |
| monomeric porin ompg | C9Z06_11635 | Not Available | Negative | 2424200 - 2425105 | 34915.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





