Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0055 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1222398 bp
Thymine Count
1219260 bp
Guanine Count
1253701 bp
Cytosine Count
1255407 bp
Genome Length
4959521 bp
Protein-coding Genes
4532 genes
Non-Coding Genes
238 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf333 domain-containing protein | C9Z06_11485 | Not Available | Negative | 2389990 - 2390256 | 8696.44 |
| pyruvate:ferredoxin (flavodoxin) oxidoreductase | C9Z06_11490 | Not Available | Positive | 2390530 - 2394054 | 128800.0 |
| porin ompn | C9Z06_11495 | Not Available | Positive | 2394420 - 2395553 | 41207.9 |
| universal stress protein uspf | C9Z06_11500 | Not Available | Positive | 2395694 - 2396128 | 15977.4 |
| trna 2-thiocytidine(32) synthetase ttca | C9Z06_11505 | Not Available | Positive | 2396304 - 2397239 | 35461.8 |
| atp-dependent rna helicase dbpa | C9Z06_11510 | Not Available | Negative | 2397368 - 2398741 | 49214.7 |
| zinc transporter zntb | C9Z06_11515 | Not Available | Negative | 2399219 - 2400202 | 36614.3 |
| diguanylate cyclase | C9Z06_11520 | Not Available | Positive | 2400457 - 2401689 | 46452.0 |
| dna endonuclease smra | C9Z06_11525 | Not Available | Negative | 2401710 - 2402273 | 21563.8 |
| lysr family transcriptional regulator | C9Z06_11530 | Not Available | Negative | 2402603 - 2403511 | 34045.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





