Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0055 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1222398 bp
Thymine Count
1219260 bp
Guanine Count
1253701 bp
Cytosine Count
1255407 bp
Genome Length
4959521 bp
Protein-coding Genes
4532 genes
Non-Coding Genes
238 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 1,2-phenylacetyl-coa epoxidase subunit a | C9Z06_11435 | Not Available | Negative | 2376458 - 2377387 | 35447.2 |
| phenylacetic acid degradation bifunctional protein paaz | C9Z06_11440 | Not Available | Positive | 2377672 - 2379717 | 73091.9 |
| primary-amine oxidase | C9Z06_11445 | Not Available | Positive | 2379965 - 2382238 | 84317.1 |
| nad-dependent phenylacetaldehyde dehydrogenase | C9Z06_11450 | Not Available | Negative | 2382296 - 2383795 | 53702.1 |
| transcriptional activator fear | C9Z06_11455 | Not Available | Positive | 2384031 - 2384936 | 34608.3 |
| duf1318 domain-containing protein | C9Z06_11460 | Not Available | Negative | 2385108 - 2385434 | 11908.5 |
| ynbe family lipoprotein | C9Z06_11465 | Not Available | Negative | 2385442 - 2385627 | 6826.49 |
| ydbh family protein | C9Z06_11470 | Not Available | Negative | 2385624 - 2388263 | 96942.4 |
| 2-hydroxyacid dehydrogenase | C9Z06_11475 | Not Available | Positive | 2388471 - 2389460 | 36522.8 |
| heat shock protein hslj | C9Z06_11480 | Not Available | Positive | 2389571 - 2389993 | 15159.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





