Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0055 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1222398 bp
Thymine Count
1219260 bp
Guanine Count
1253701 bp
Cytosine Count
1255407 bp
Genome Length
4959521 bp
Protein-coding Genes
4532 genes
Non-Coding Genes
238 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ydcf family protein | C9Z06_11330 | Not Available | Negative | 2352211 - 2353011 | 29721.4 |
| atp-dependent rna helicase hrpa | C9Z06_11335 | Not Available | Negative | 2353283 - 2357185 | 148953.0 |
| fmn-dependent nadh-azoreductase | C9Z06_11340 | Not Available | Positive | 2357386 - 2357991 | 21642.9 |
| hypothetical protein | C9Z06_11345 | Not Available | Negative | 2358042 - 2359358 | 50514.6 |
| alpha/beta fold hydrolase | C9Z06_11350 | Not Available | Negative | 2359348 - 2361105 | 65388.3 |
| hypothetical protein | C9Z06_11355 | Not Available | Negative | 2361121 - 2362017 | 33279.0 |
| cdp-alcohol phosphatidyltransferase family protein | C9Z06_11360 | Not Available | Negative | 2362017 - 2362622 | 22654.6 |
| oxidoreductase | C9Z06_11370 | Not Available | Negative | 2365162 - 2366022 | 30707.8 |
| phenylacetic acid degradation protein paay | C9Z06_11375 | Not Available | Negative | 2366253 - 2366843 | 21441.0 |
| phenylacetic acid degradation operon negative regulatory protein paax | C9Z06_11380 | Not Available | Negative | 2366825 - 2367775 | 35284.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





