Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0055 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1222398 bp
Thymine Count
1219260 bp
Guanine Count
1253701 bp
Cytosine Count
1255407 bp
Genome Length
4959521 bp
Protein-coding Genes
4532 genes
Non-Coding Genes
238 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| melibiose:sodium transporter melb | C9Z06_10690 | Not Available | Negative | 2210326 - 2211747 | 52627.5 |
| alpha-glucosidase/alpha-galactosidase | C9Z06_10695 | Not Available | Negative | 2211850 - 2213205 | 50686.9 |
| melibiose operon regulatory protein | C9Z06_10700 | Not Available | Positive | 2213488 - 2214396 | 34929.9 |
| arginine decarboxylase | C9Z06_10705 | Not Available | Positive | 2214595 - 2216862 | 84475.9 |
| transcriptional regulator | C9Z06_10710 | Not Available | Positive | 2217187 - 2217948 | 29022.4 |
| arginine:agmatine antiporter | C9Z06_10715 | Not Available | Positive | 2218085 - 2219422 | 46845.3 |
| phosphoethanolamine transferase epta | C9Z06_10720 | Not Available | Positive | 2219526 - 2221169 | 61598.5 |
| two-component system response regulator basr | C9Z06_10725 | Not Available | Positive | 2221166 - 2221834 | 25002.3 |
| two-component system sensor histidine kinase pmrb | C9Z06_10730 | Not Available | Positive | 2221844 - 2222935 | 40924.7 |
| lpxt activity modulator pmrr | C9Z06_10735 | Not Available | Negative | 2222911 - 2223000 | 3449.23 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





