Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0055 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1222398 bp
Thymine Count
1219260 bp
Guanine Count
1253701 bp
Cytosine Count
1255407 bp
Genome Length
4959521 bp
Protein-coding Genes
4532 genes
Non-Coding Genes
238 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ghot/ortt family toxin | C9Z06_10640 | Not Available | Negative | 2202034 - 2202207 | 6583.5 |
| endoribonuclease ghos | C9Z06_10645 | Not Available | Negative | 2202235 - 2202531 | 11468.6 |
| n-acetyltransferase | C9Z06_10650 | Not Available | Negative | 2202758 - 2203030 | 10469.6 |
| 4fe-4s mono-cluster protein yjdi | C9Z06_10655 | Not Available | Negative | 2203042 - 2203272 | 8650.47 |
| two-component system sensor histidine kinase dcus | C9Z06_10660 | Not Available | Positive | 2203453 - 2205084 | 60585.5 |
| two-component system response regulator dcur | C9Z06_10665 | Not Available | Positive | 2205081 - 2205800 | 27489.9 |
| anaerobic c4-dicarboxylate transporter dcub | C9Z06_10670 | Not Available | Positive | 2206371 - 2207711 | 47938.2 |
| fumarate hydratase class i, anaerobic | C9Z06_10675 | Not Available | Positive | 2207789 - 2209435 | 60078.7 |
| duf2238 domain-containing protein | C9Z06_10680 | Not Available | Positive | 2209558 - 2210187 | 23358.3 |
| hypothetical protein | C9Z06_10685 | Not Available | Positive | 2210192 - 2210371 | 6324.69 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





