Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0055 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1222398 bp
Thymine Count
1219260 bp
Guanine Count
1253701 bp
Cytosine Count
1255407 bp
Genome Length
4959521 bp
Protein-coding Genes
4532 genes
Non-Coding Genes
238 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribokinase | C9Z06_10540 | Not Available | Positive | 2177368 - 2178297 | 32292.4 |
| transcriptional regulator rbsr | C9Z06_10545 | Not Available | Positive | 2178301 - 2179293 | 36573.1 |
| dha2 family efflux mfs transporter permease subunit | C9Z06_10550 | Not Available | Negative | 2179259 - 2180686 | 51473.9 |
| fadr family transcriptional regulator | C9Z06_10555 | Not Available | Negative | 2180709 - 2181401 | 26063.5 |
| duf4156 domain-containing protein | C9Z06_10560 | Not Available | Negative | 2181953 - 2182306 | 11959.2 |
| chaperonin groel | C9Z06_10565 | Not Available | Negative | 2182444 - 2184090 | 57332.4 |
| co-chaperone groes | C9Z06_10570 | Not Available | Negative | 2184134 - 2184427 | 10387.6 |
| l-methionine/branched-chain amino acid exporter yjeh | C9Z06_10575 | Not Available | Positive | 2184703 - 2185959 | 44780.2 |
| membrane protein fxsa | C9Z06_10580 | Not Available | Negative | 2185975 - 2186451 | 17693.1 |
| aspartate ammonia-lyase | C9Z06_10585 | Not Available | Positive | 2186788 - 2188224 | 52359.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





