Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0055 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1222398 bp
Thymine Count
1219260 bp
Guanine Count
1253701 bp
Cytosine Count
1255407 bp
Genome Length
4959521 bp
Protein-coding Genes
4532 genes
Non-Coding Genes
238 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna topoisomerase (atp-hydrolyzing) subunit b | C9Z06_10240 | Not Available | Negative | 2112648 - 2115062 | 89974.1 |
| dna replication/repair protein recf | C9Z06_10245 | Not Available | Negative | 2115091 - 2116164 | 40544.4 |
| dna polymerase iii subunit beta | C9Z06_10250 | Not Available | Negative | 2116164 - 2117264 | 40589.1 |
| chromosomal replication initiator protein dnaa | C9Z06_10255 | Not Available | Negative | 2117269 - 2118672 | 52553.7 |
| hypothetical protein | C9Z06_10260 | Not Available | Positive | 2118969 - 2119049 | 3111.7 |
| 50s ribosomal protein l34 | C9Z06_10265 | Not Available | Positive | 2119279 - 2119419 | 5380.74 |
| ribonuclease p protein component | C9Z06_10270 | Not Available | Positive | 2119436 - 2119795 | 13790.0 |
| membrane protein insertion efficiency factor yidd | C9Z06_10275 | Not Available | Positive | 2119759 - 2120016 | 9381.61 |
| membrane protein insertase yidc | C9Z06_10280 | Not Available | Positive | 2120019 - 2121665 | 61543.5 |
| trna uridine-5-carboxymethylaminomethyl(34) synthesis gtpase mnme | C9Z06_10285 | Not Available | Positive | 2121771 - 2123135 | 49247.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





