Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0055 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1222398 bp
Thymine Count
1219260 bp
Guanine Count
1253701 bp
Cytosine Count
1255407 bp
Genome Length
4959521 bp
Protein-coding Genes
4532 genes
Non-Coding Genes
238 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lipopolysaccharide core heptosyltransferase rfaq | C9Z06_09885 | Not Available | Negative | 2041184 - 2042242 | 39448.9 |
| 3-deoxy-d-manno-octulosonic acid transferase | C9Z06_09890 | Not Available | Positive | 2042655 - 2043932 | 47293.9 |
| pantetheine-phosphate adenylyltransferase | C9Z06_09895 | Not Available | Positive | 2043940 - 2044419 | 17837.7 |
| bifunctional dna-formamidopyrimidine glycosylase/dna-(apurinic or apyrimidinic site) lyase | C9Z06_09900 | Not Available | Negative | 2044458 - 2045267 | 30261.8 |
| 50s ribosomal protein l33 | C9Z06_09905 | Not Available | Negative | 2045365 - 2045532 | 6371.94 |
| 50s ribosomal protein l28 | C9Z06_09910 | Not Available | Negative | 2045553 - 2045789 | 9007.02 |
| jab domain-containing protein | C9Z06_09915 | Not Available | Negative | 2046006 - 2046674 | 25275.9 |
| bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase coabc | C9Z06_09920 | Not Available | Positive | 2046846 - 2048066 | 43440.7 |
| dutp diphosphatase | C9Z06_09925 | Not Available | Positive | 2048047 - 2048502 | 16157.4 |
| nucleoid occlusion factor slma | C9Z06_09930 | Not Available | Positive | 2048609 - 2049205 | 22837.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





