Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0055 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1222398 bp
Thymine Count
1219260 bp
Guanine Count
1253701 bp
Cytosine Count
1255407 bp
Genome Length
4959521 bp
Protein-coding Genes
4532 genes
Non-Coding Genes
238 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| beta-galactosidase subunit alpha | C9Z06_09325 | Not Available | Positive | 1928915 - 1932007 | 117837.0 |
| evolved beta-galactosidase subunit beta | C9Z06_09330 | Not Available | Positive | 1932004 - 1932453 | 17457.6 |
| amino acid permease | C9Z06_09335 | Not Available | Positive | 1932516 - 1933949 | 52191.7 |
| protein ygjj | C9Z06_09340 | Not Available | Positive | 1934083 - 1935153 | 40101.5 |
| alpha-glucosidase | C9Z06_09345 | Not Available | Positive | 1935170 - 1937521 | 88281.6 |
| nadph-dependent 2,4-dienoyl-coa reductase | C9Z06_09350 | Not Available | Positive | 1937847 - 1939865 | 72742.6 |
| type ii toxin-antitoxin system higa family antitoxin | C9Z06_09355 | Not Available | Negative | 1939910 - 1940326 | 14996.3 |
| 23s rrna (guanine(1835)-n(2))-methyltransferase rlmg | C9Z06_09365 | Not Available | Negative | 1940597 - 1941733 | 42350.9 |
| m48 family peptidase | C9Z06_09370 | Not Available | Positive | 1941818 - 1942321 | 19456.6 |
| vancomycin high temperature exclusion protein | C9Z06_09375 | Not Available | Positive | 1942398 - 1943081 | 25271.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





