Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0055 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1222398 bp
Thymine Count
1219260 bp
Guanine Count
1253701 bp
Cytosine Count
1255407 bp
Genome Length
4959521 bp
Protein-coding Genes
4532 genes
Non-Coding Genes
238 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna primase | C9Z06_09275 | Not Available | Positive | 1917389 - 1919134 | 65568.5 |
| rna polymerase sigma factor rpod | C9Z06_09280 | Not Available | Positive | 1919329 - 1921170 | 70211.2 |
| g/u mismatch-specific dna glycosylase | C9Z06_09285 | Not Available | Negative | 1921249 - 1921755 | 18674.5 |
| Trna-met | Not Available | Not Available | Positive | 1921880 - 1921955 | Not Available |
| siderophore-interacting protein | C9Z06_09295 | Not Available | Negative | 1922009 - 1922773 | 28849.0 |
| padr family transcriptional regulator | C9Z06_09300 | Not Available | Positive | 1923061 - 1923684 | 23402.7 |
| pas domain s-box protein | C9Z06_09305 | Not Available | Negative | 1923838 - 1925358 | 55134.1 |
| putrescine aminotransferase | C9Z06_09310 | Not Available | Positive | 1925665 - 1927155 | 53883.5 |
| pp_01836 | C9Z06_09315 | Not Available | Negative | 1927197 - 1927529 | Not Available |
| transcriptional regulator ebgr | C9Z06_09320 | Not Available | Positive | 1927748 - 1928731 | 36274.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





