Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0055 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1222398 bp
Thymine Count
1219260 bp
Guanine Count
1253701 bp
Cytosine Count
1255407 bp
Genome Length
4959521 bp
Protein-coding Genes
4532 genes
Non-Coding Genes
238 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arac family transcriptional regulator | C9Z06_09020 | Not Available | Negative | 1868105 - 1868587 | 17782.2 |
| ygiw/ydei family stress tolerance ob fold protein | C9Z06_09025 | Not Available | Negative | 1868640 - 1869032 | 14011.5 |
| two-component system response regulator qseb | C9Z06_09030 | Not Available | Positive | 1869184 - 1869843 | 24747.2 |
| two-component system sensor histidine kinase qsec | C9Z06_09035 | Not Available | Positive | 1869840 - 1871189 | 50346.8 |
| duf2645 family protein | C9Z06_09040 | Not Available | Negative | 1871235 - 1871567 | 13194.7 |
| flavodoxin family protein | C9Z06_09045 | Not Available | Positive | 1871886 - 1872467 | 21876.1 |
| quinol monooxygenase ygin | C9Z06_09050 | Not Available | Positive | 1872498 - 1872812 | 11533.1 |
| mfs transporter | C9Z06_09055 | Not Available | Negative | 1872856 - 1874187 | 49527.0 |
| hypothetical protein | C9Z06_09060 | Not Available | Negative | 1874258 - 1874455 | 7620.53 |
| gntr family transcriptional regulator | C9Z06_09065 | Not Available | Positive | 1874474 - 1875226 | 28530.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





