Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0055 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1222398 bp
Thymine Count
1219260 bp
Guanine Count
1253701 bp
Cytosine Count
1255407 bp
Genome Length
4959521 bp
Protein-coding Genes
4532 genes
Non-Coding Genes
238 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| poly-beta-1,6-n-acetyl-d-glucosamine n-deacetylase pgab | C9Z06_08870 | Not Available | Negative | 1834626 - 1836644 | 77416.9 |
| poly-beta-1,6 n-acetyl-d-glucosamine export porin pgaa | C9Z06_08875 | Not Available | Negative | 1836653 - 1839076 | 92211.9 |
| ggdef domain-containing protein | C9Z06_08880 | Not Available | Positive | 1839663 - 1841021 | 51772.5 |
| is3 family transposase | C9Z06_08885 | Not Available | Negative | 1841062 - 1841211 | 5944.95 |
| hydrogenase-2 operon protein hybg | C9Z06_08890 | Not Available | Negative | 1841300 - 1841548 | 8808.67 |
| hydrogenase nickel incorporation protein hybf | C9Z06_08895 | Not Available | Negative | 1841561 - 1841902 | 12698.1 |
| hydrogenase-2 operon protein hybe | C9Z06_08900 | Not Available | Negative | 1841895 - 1842383 | 17964.7 |
| hyad/hybd family hydrogenase maturation endopeptidase | C9Z06_08905 | Not Available | Negative | 1842376 - 1842870 | 17724.8 |
| hydrogenase-2 large chain | C9Z06_08910 | Not Available | Negative | 1842870 - 1844573 | 62494.6 |
| ni/fe-hydrogenase b-type cytochrome subunit | C9Z06_08915 | Not Available | Negative | 1844570 - 1845748 | 43604.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





