Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0055 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1222398 bp
Thymine Count
1219260 bp
Guanine Count
1253701 bp
Cytosine Count
1255407 bp
Genome Length
4959521 bp
Protein-coding Genes
4532 genes
Non-Coding Genes
238 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hydrogenase 1 maturation protease | C9Z06_08620 | Not Available | Positive | 1783572 - 1784159 | 21547.7 |
| hydrogenase-1 operon protein hyae | C9Z06_08625 | Not Available | Positive | 1784156 - 1784554 | 14880.6 |
| hydrogenase-1 operon protein hyaf | C9Z06_08630 | Not Available | Positive | 1784551 - 1785408 | 31432.5 |
| cytochrome bd-ii oxidase subunit 1 | C9Z06_08635 | Not Available | Positive | 1785542 - 1787086 | 57996.3 |
| cytochrome bd-ii ubiquinol oxidase subunit 2 | C9Z06_08640 | Not Available | Positive | 1787098 - 1788234 | 42426.3 |
| cytochrome bd-ii oxidase subunit cbdx | C9Z06_08645 | Not Available | Positive | 1788247 - 1788339 | 3597.68 |
| appa family phytase/histidine-type acid phosphatase | C9Z06_08650 | Not Available | Positive | 1788419 - 1789717 | 47032.5 |
| tyrosine-protein kinase etk | C9Z06_08655 | Not Available | Negative | 1789832 - 1792012 | 81246.5 |
| protein-tyrosine-phosphatase | C9Z06_08660 | Not Available | Negative | 1792032 - 1792478 | 16386.9 |
| polysaccharide export protein | C9Z06_08665 | Not Available | Negative | 1792466 - 1793605 | 41743.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





