Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0055 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1222398 bp
Thymine Count
1219260 bp
Guanine Count
1253701 bp
Cytosine Count
1255407 bp
Genome Length
4959521 bp
Protein-coding Genes
4532 genes
Non-Coding Genes
238 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| low-affinity gluconate transporter | C9Z06_07605 | Not Available | Positive | 1553056 - 1554396 | 46418.9 |
| naat family transporter yhgn | C9Z06_07610 | Not Available | Negative | 1554453 - 1555046 | 21491.9 |
| aspartate-semialdehyde dehydrogenase | C9Z06_07615 | Not Available | Positive | 1555239 - 1556342 | 40020.2 |
| 1,4-alpha-glucan branching enzyme | C9Z06_07620 | Not Available | Positive | 1556615 - 1558801 | 84341.4 |
| glycogen debranching protein glgx | C9Z06_07625 | Not Available | Positive | 1558798 - 1560771 | 73594.6 |
| glucose-1-phosphate adenylyltransferase | C9Z06_07630 | Not Available | Positive | 1560789 - 1562084 | 48700.4 |
| glycogen synthase glga | C9Z06_07635 | Not Available | Positive | 1562084 - 1563517 | 52825.4 |
| glycogen phosphorylase | C9Z06_07640 | Not Available | Positive | 1563536 - 1565983 | 93177.7 |
| psts family phosphate abc transporter substrate-binding protein | C9Z06_07645 | Not Available | Positive | 1566108 - 1567616 | 56604.9 |
| hypothetical protein | C9Z06_07650 | Not Available | Positive | 1567631 - 1568341 | 26534.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





