Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0055 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1222398 bp
Thymine Count
1219260 bp
Guanine Count
1253701 bp
Cytosine Count
1255407 bp
Genome Length
4959521 bp
Protein-coding Genes
4532 genes
Non-Coding Genes
238 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| outer membrane protein assembly factor bamc | C9Z06_06835 | Not Available | Positive | 1399867 - 1400901 | 36812.4 |
| phosphoribosylaminoimidazolesuccinocarboxamide synthase | C9Z06_06840 | Not Available | Positive | 1401114 - 1401827 | 26996.5 |
| antitoxin | C9Z06_06845 | Not Available | Positive | 1401981 - 1402208 | 8499.05 |
| trna(fmet)-specific endonuclease vapc | C9Z06_06850 | Not Available | Positive | 1402208 - 1402606 | 14895.2 |
| neutral zinc metallopeptidase | C9Z06_06855 | Not Available | Positive | 1402753 - 1403616 | 31462.0 |
| trna(met) cytidine acetyltransferase | C9Z06_06860 | Not Available | Positive | 1403631 - 1405646 | 74737.4 |
| esterase | C9Z06_06865 | Not Available | Positive | 1405720 - 1406418 | 24814.5 |
| ypfn family protein | C9Z06_06870 | Not Available | Negative | 1406528 - 1406728 | 8071.78 |
| succinyl-diaminopimelate desuccinylase | C9Z06_06875 | Not Available | Negative | 1406756 - 1407883 | 41271.4 |
| arsc family reductase | C9Z06_06880 | Not Available | Negative | 1407887 - 1408243 | 13515.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





