Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0055 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1222398 bp
Thymine Count
1219260 bp
Guanine Count
1253701 bp
Cytosine Count
1255407 bp
Genome Length
4959521 bp
Protein-coding Genes
4532 genes
Non-Coding Genes
238 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| penicillin-binding protein 1c | C9Z06_06625 | Not Available | Positive | 1351618 - 1353930 | 85098.9 |
| nucleoside-diphosphate kinase | C9Z06_06630 | Not Available | Positive | 1354079 - 1354510 | 15464.3 |
| bifunctional trna (adenosine(37)-c2)-methyltransferase trmg/ribosomal rna large subunit methyltransferase rlmn | C9Z06_06635 | Not Available | Positive | 1354660 - 1355814 | 43088.0 |
| cytoskeleton protein rodz | C9Z06_06640 | Not Available | Positive | 1356099 - 1357112 | 36176.5 |
| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (flavodoxin) | C9Z06_06645 | Not Available | Positive | 1357139 - 1358257 | 40686.1 |
| histidine--trna ligase | C9Z06_06650 | Not Available | Positive | 1358368 - 1359642 | 47044.2 |
| ancillary secyeg translocon subunit | C9Z06_06655 | Not Available | Positive | 1359660 - 1360280 | 22177.2 |
| outer membrane protein assembly factor bamb | C9Z06_06660 | Not Available | Positive | 1360291 - 1361469 | 41829.5 |
| 50s ribosomal subunit stability factor | C9Z06_06665 | Not Available | Positive | 1361587 - 1363059 | 55039.1 |
| hypothetical protein | C9Z06_06670 | Not Available | Positive | 1363128 - 1363343 | 7901.64 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





