Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0055 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1222398 bp
Thymine Count
1219260 bp
Guanine Count
1253701 bp
Cytosine Count
1255407 bp
Genome Length
4959521 bp
Protein-coding Genes
4532 genes
Non-Coding Genes
238 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-phenylpropionate/cinnamic acid dioxygenase ferredoxin subunit | C9Z06_06520 | Not Available | Negative | 1328194 - 1328514 | 11329.3 |
| 3-phenylpropionate/cinnamic acid dioxygenase subunit beta | C9Z06_06525 | Not Available | Negative | 1328514 - 1329032 | 20580.3 |
| 3-phenylpropionate/cinnamic acid dioxygenase subunit alpha | C9Z06_06530 | Not Available | Negative | 1329029 - 1330390 | 51111.8 |
| dna-binding transcriptional regulator hcar | C9Z06_06535 | Not Available | Positive | 1330526 - 1331416 | 32839.2 |
| 3-phenylpropionate mfs transporter | C9Z06_06540 | Not Available | Positive | 1331576 - 1332715 | 41595.1 |
| stationary phase inducible protein csie | C9Z06_06545 | Not Available | Negative | 1332707 - 1333987 | 48978.2 |
| alpha/beta hydrolase | C9Z06_06550 | Not Available | Negative | 1334178 - 1335032 | 31445.6 |
| inositol-1-monophosphatase | C9Z06_06555 | Not Available | Negative | 1335177 - 1335980 | 29173.8 |
| trna (cytosine(32)/uridine(32)-2'-o)-methyltransferase trmj | C9Z06_06560 | Not Available | Positive | 1336099 - 1336836 | 26920.4 |
| fe-s cluster assembly transcriptional regulator iscr | C9Z06_06565 | Not Available | Positive | 1337137 - 1337625 | 17349.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





